XDigitize
A visualization software system for evaluation of hybridisation experiments.
Premier Biosoft International
Developers of software for real time PCR primer design, TaqMan, molecular beacons, SYBR green, FRET, DNA microarray analysis, restriction cloning, plasmid maps, gateway cloning, protein interaction network and functional genomics.
Meta-MEME v2.0.1
Software toolkit for building and using motif-based hidden Markov models of DNA and proteins - from the Univ. of California-San Diego.
Linux Software Encyclopedia - Bioinformatics
Links to Bioinformatics software for Linux. From the Linux Software Encyclopedia.
Molecular Evolutionary Genetics Analysis (MEGA2) software
Provides free downloadable MEGA2 software for use in comparative sequence analysis of genetic data. Program for Win32 platforms.
Computer Program for Polyphasic Taxonomy Analysis
The proBiosys suite of programs compares phenetic, chemotaxonomic and nucleic acid sequence data. Algorithms for polyphasic taxonomy are available to construct Dendrograms, the suite is simple to use.
HMMER - profile hidden Markov models for sequence analysis
Sean Eddy's tools to build HMMs from multiple alignments, align sequences to HMMs, calculate e-scores, and other tools
The Sanger Centre: Software
Production software used at the Sanger Centre, physical mapping software, informatics and analysis software, and data formats
PubCrawler - An Update Alerting Service for PubMed and GenBank
Software and an online service for periodically performing predefined searches at NCBI, reporting new results by email or on the web.
Phred/Phrap/Consed System Home Page
basecaller / assembler / sequencer finisher and related tools from the UW Genome Center.
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